Ecommerce accounting automation

Automate Your Ecommerce Accounting and Close Your Books 3X Faster

Save up to 90% of the time spent on reconciliation and month-end close, and automate 10–15 hours of manual data entry every week.

Ecommerce accounting automation

The Most Powerful Way to Automate Ecommerce Accounting

Webgility automates ecommerce accounting end-to-end, syncing every sale, return, and fee in real time — so you can focus on growing your business, not balancing your books.

Real-time ecommerce accounting automation

  • Instantly sync every order, return, and fee from all your sales channels
  • Track individual customers and items in the sale
  • Automatically match existing customers and items
  • Create new customers or new items on the fly
  • Record every discount and coupon code detail
  • Record sales taxes collected per state
  • Record order notes
  • Record shipping income and details, including tracking info
  • Track gift card charges, coupons, and more
  • Use transaction classes for improved reporting
  • Granularly map field-level details from your sales channel to accounting

Manage returns and refunds with ease

  • Create credit memos or refund receipts for every return
  • Automatically update inventory of returned items
  • Reverse the right account for every return to simplify reconciliation

Break out your orders into separate accounts for easier reconciliation

  • Post orders differently for each marketplace, online store, point of sale location, or third-party application
  • Specify different settings for order types: B2C, B2B, or POS
  • Post orders into different accounts based on the payment processor
  • Post orders into different accounts based on order status
  • Create sales receipts for paid orders and invoices for unpaid orders
  • Use different settings for different types of orders
  • Separate rules for posting sales and refunds

Automatically update inventory with every sale

  • Update the inventory level in your accounting as sales are posted
  • Works with group items, assemblies, and bundled products
  • Works with QuickBooks Advanced Inventory module

Record all your payment, shipping and marketplace expenses

  • Record fees into the expense account of your choice
  • Track fees as a group or map every granular fee type
  • Bring in fees with every payout
  • Connect your payment processor and shipping app to bring in fees for every order
Explore Sandbox  ·  No Signup Required

See Webgility in Action.

A real instance pre-loaded with sample orders, channels, and accounting entries. Nothing to install. No account needed.

🔒 my-sandbox.webgility.com
Online
CONTACT SALES
PREVIEW MODE
S Shopify Store
Open the Sandbox
Free to explore  ·  No account needed  ·  Sample data only

Online Store, Marketplace, or Point of Sale. B2C or B2B. In-House, 3PL, or FBA. Single Channel, Multichannel, or Omnichannel.

Webgility can handle it all with a single app.

Reconciliation

Reconcile and Close the Books in Minutes

Accurately capture all orders and transactions in QuickBooks as they happen, not days or weeks later. Automatically post transactions as sales receipts, and easily deposit funds to dedicated clearing accounts.

  • Update your books in real-time, on a daily basis, or with every payout
  • Track your income and expenses accurately
  • Track your bank deposits from each marketplace and payment processor
  • Quickly and accurately reconcile your net income with your bank deposits in minutes
  • Get up-to-the-cent accuracy without any manual work
  • See all your transactions in one place, track history, and audit with ease
CLEARING ACCOUNT RECONCILIATION
net_income$18,204.55
bank_deposits$18,204.55

variance$0.00 · matched ✓
Compliance

Track Your Sales Tax Liabilities and Always Be Compliant

  • Track the sales tax collected from all your sales channels
  • Map the tax collected for every state where you have nexus to the right sales tax account for easy filing and reporting
  • If you're using a third-party tool like Avalara for sales tax filing and reporting, map sales tax collected to a single sales tax account so your books are accurate
  • Have full confidence in your tax compliance and financial reporting across all sales channels
  • Save money on outsourced ecommerce bookkeeping and accounting
Sales Tax by State Nexus-mapped
California nexusSales Tax Payable CA
New York nexusSales Tax Payable NY
Avalara filingMapped to single tax account
Expense Visibility

Track All Your Ecommerce Expenses to Uncover Margin Drivers

🏪
Marketplace Fees

Webgility brings in all the fees from Amazon Settlement Reports (including FBA), Shopify Payouts, and eBay Invoice Reports into your accounting system. Group fees at a high level or track them down to the fee type for a full picture of your expenses.

📦
Shipping Expenses

Connect Webgility to ShipStation or ShippingEasy to bring in the actual shipping fees for every order and record it into your accounting. Get a true picture of your order-level shipping income vs. expense to find opportunities to drive margin.

💳
Payment Fees

Connect Webgility to Shopify Pay, Stripe, Authorize.net, or PayPal to bring in the actual payment fees for every order and record it into your accounting. Get a true picture of your order-level payment fees to find opportunities to drive margin.

Purchasing

Simplify the Purchase Order Process with Automation

📈
Avoid Stockouts and Keep Customers Happy

Webgility helps you set buffers for inventory and generate purchase orders well before you run out of popular items. Purchase order automation checks the quantity of items in QuickBooks Desktop/Enterprise, then creates purchase orders only for items that are out of stock — so you can restock proactively and keep customers from going to competitors.

Generate Purchase Orders as Soon as Orders Post

Purchase order automation software creates a PO for every order posted to QuickBooks Desktop. For example, if nine orders are posted, there will be nine purchase orders in QuickBooks — generated from templates or based on customizable settings.

🚚
Generate Purchase Orders for Dropship-Only Items

Specify products in QuickBooks Desktop as dropship items. When it's time to generate purchase orders for those items, configure Webgility to create purchase orders for dropship items only.

Webgility by the numbers

Trusted by Growing Ecommerce Businesses

10
Hours per week saved on manual processes
94%
What automation can save on everyday costs
700+
5-star reviews in the QuickBooks App Store
Reporting

Turbo Charge Your Reporting and Get a True Picture of Your Margins

Webgility captures all your ecommerce sales and expenses at a summary or granular level into your accounting so you can generate powerful reports.

  • Get a true picture of your income and expenses by sales channel or payment processor
  • Analyze your margins, marketplace fees, and shipping costs in depth
  • Ditch the spreadsheets and dive into Webgility's analytics for even more powerful reports, including pivot tables
By channel
Income & expense breakdown
Deep margin
Fee & shipping analysis
Pivot tables
Beyond spreadsheets
Collaboration

All Your Channels. All Your People. In One Place.

  • Connect all your ecommerce channels and bring all your data into one system
  • Invite your accountant or bookkeeper for shared access
  • Add unlimited users without any extra cost
  • Control which user has access to certain features (Webgility Desktop plans only)
Team Access Unlimited users
Accountant / bookkeeperShared access
Additional team membersNo extra cost
Feature-level permissionsDesktop plans
Security

Your Data Is Secure and Always Private

We protect your personal information using industry-recognized security safeguards.

  • Webgility has gone through rigorous compliance reviews by Intuit, Amazon, and other providers to ensure your data is secure and protected
  • We conduct regular penetration testing and comply fully with GDPR and CCPA regulations
Compliance Reviewed
Intuit & Amazon reviewCompliance-approved
Penetration testingRegular cadence
GDPR & CCPAFully compliant
Support

Personalized Onboarding and Unlimited Support by Ecommerce Accounting Experts

All Webgility plans include free implementation and training by our resident ecommerce experts, so you can get started easily. 5-star rated support without any limits via email, chat, or phone.

Let's Start Automating Your Accounting Today

15-day free trial · Personalized onboarding · No coding required · No credit card required.

Questions

FAQs About Our Accounting Features

Can Webgility remit sales tax?
Webgility maps and records the sales tax collected from every sales channel into the correct sales tax liability accounts in QuickBooks, so your books stay accurate for filing. Webgility does not itself remit sales tax payments to states — for automated remittance and filing, Webgility integrates with third-party tools like Avalara.
Does Webgility calculate sales tax?
Webgility records the sales tax that your sales channels (Shopify, Amazon, and others) have already calculated and collected at checkout, mapping it to the correct state-level tax accounts in QuickBooks. It doesn't calculate tax rates itself — that calculation happens at the point of sale on each channel.
Can I deduct Webgility from my taxes?
Software subscriptions used for business operations, like Webgility, are generally treated as a deductible business expense. Every business's tax situation is different, though, so check with your accountant or tax advisor to confirm how to handle it for your specific filing.
What else can Webgility do for my ecommerce business?
Beyond accounting automation, Webgility also handles inventory and pricing sync, purchase order automation, payout reconciliation, and real-time financial reporting across all your connected sales channels — so your books, inventory, and purchasing all stay in sync from one platform.
The Demo

Find out what your operational gaps are actually costing you.

Our team of experts will help surface your operations and finance concerns. In 30 minutes, we will discuss your channels, accounting setup, leakages, inventory inconsistencies, and close process.

Operational Snapshot ● Live
Orders reconciled today 1,247 ✓
Amazon payout tied out $47,241 ✓
Exceptions resolved 3 cleared
Inventory synced All channels ✓
Books status Certified ✓